Discussion
Loading...

#Tag

  • About
  • Code of conduct
  • Privacy
  • Users
  • Instances
  • About Bonfire
All Europeans 🇪🇺 boosted
petersuber
@petersuber@fediscience.org  ·  activity timestamp 6 months ago

"Germany’s Plan for an Open and Independent PubMed Safety Net."
https://absolutelymaybe.plos.org/2025/05/14/germanys-plan-for-an-open-and-independent-pubmed-safety-net/

" #Germany has stepped up to this challenge. On May 2, the German National Library of Medicine ( #ZBMED), announced they were planning to develop an “open, reliable, and sustainable” alternative to #PubMed."

#Censorship#DefendResearch#OpenInfrastructure#Preservation#Takedowns #Trump #TrumpVResearch#USPol#USPolitics

  • Copy link
  • Flag this post
  • Block
Joseph Szymborski :qcca:
@jszym@cosocial.ca  ·  activity timestamp 4 months ago

My question for #researchers in the fields of #biology , #genetics , #medecine , etc... is are we going to be ready for the possibility of #PubMed and other #NIH online databases and services becoming one of the many casualties of the current #US administration and its increasingly unreliable #HHS department?

This is an interesting opportunity for the broader international research community to create a more distributed, resilient alternative. Scientists, citizen or otherwise... any ideas? #phd

  • Copy link
  • Flag this post
  • Block
Ulrike Hahn boosted
Strypey
@strypey@mastodon.nzoss.nz  ·  activity timestamp 5 months ago

"The big vision is to move past the reliance on any single country’s investment in this core life sciences infrastructure: It’s not to have a duplicative, parallel structure in Germany, nor to simply transplant a centralized system from the US to Germany. The goal is a fully open source, federated, safety net, embedded within the international community, with a strong global network of support."

@hildabast, 2025

https://absolutelymaybe.plos.org/2025/05/14/germanys-plan-for-an-open-and-independent-pubmed-safety-net/

The project account; @ZBMED.

#OpenScience#PubMed#ZBMED

  • Copy link
  • Flag this post
  • Block
Hilda Bastian
@hildabast@mastodon.online  ·  activity timestamp 5 months ago

Funding bid for OLSPub, Germany's planned PubMed open safety net from @ZBMED submitted. You can sign up to register your support here: https://blog.zbmed.de/olspub-support

Institutional letter of support template here: https://www.zbmed.de/fileadmin/user_upload/Pressemitteilungen/2025/2025-05-05_LoS_PubMed_Alternative_ZB_MED.pdf

Background at my blog: https://absolutelymaybe.plos.org/2025/05/14/germanys-plan-for-an-open-and-independent-pubmed-safety-net/

#OpenScience#MedLibs#Fosstodon

Strypey
@strypey@mastodon.nzoss.nz replied  ·  activity timestamp 5 months ago

"The big vision is to move past the reliance on any single country’s investment in this core life sciences infrastructure: It’s not to have a duplicative, parallel structure in Germany, nor to simply transplant a centralized system from the US to Germany. The goal is a fully open source, federated, safety net, embedded within the international community, with a strong global network of support."

@hildabast, 2025

https://absolutelymaybe.plos.org/2025/05/14/germanys-plan-for-an-open-and-independent-pubmed-safety-net/

The project account; @ZBMED.

#OpenScience#PubMed#ZBMED

  • Copy link
  • Flag this comment
  • Block
Colin Sidre
@colinsidre@piaille.fr  ·  activity timestamp 6 months ago

Update pour les Mastonautes qui veulent les dernières mises à jour sur les risques encourus par PubMed :
- J'ai publié une nouvelle version de la note aujourd'hui : https://zenodo.org/records/15481800
- Si vous voulez déprimer pendant 1h15, je suis intervenu sur le sujet à MediaM la semaine dernière, et c'est sur canal-u : https://www.canal-u.tv/chaines/callisto/point-d-actualite-pubmed-sous-l-administration-trump-12052025

La grosse bonne nouvelle (qui est sortie après la vidéo), c'est le projet de la ZB MED de développer un PubMed européen ! C'est le projet OLSPub, détaillé ici (page en allemand et en anglais) : https://www.zbmed.de/forschen/laufende-projekte/olspub. La page est régulièrement mise à jour, et la ZB MED a lancé un appel à soutiens.

#pubmed #medline #medlibs

  • Copy link
  • Flag this post
  • Block
petersuber
@petersuber@fediscience.org  ·  activity timestamp 6 months ago

"Germany’s Plan for an Open and Independent PubMed Safety Net."
https://absolutelymaybe.plos.org/2025/05/14/germanys-plan-for-an-open-and-independent-pubmed-safety-net/

" #Germany has stepped up to this challenge. On May 2, the German National Library of Medicine ( #ZBMED), announced they were planning to develop an “open, reliable, and sustainable” alternative to #PubMed."

#Censorship#DefendResearch#OpenInfrastructure#Preservation#Takedowns #Trump #TrumpVResearch#USPol#USPolitics

  • Copy link
  • Flag this post
  • Block
petersuber
@petersuber@fediscience.org  ·  activity timestamp 6 months ago

Update. "Because of #Trump: [The German] Central Library of #Medicine builds alternative to US database."
https://www.heise.de/news/Wegen-Trump-Zentralbibliothek-Medizin-baut-Alternative-zu-US-Datenbank-auf-10372291.html

From Google's English: "The German National Library of Medicine ( #ZBMed) has announced its intention to create an "open, reliable, and sustainable alternative" to the #PubMed database, one of the most important and comprehensive resources for biomedical literature worldwide. The meta-database, with references to relevant articles and over 38 million citations, is operated by the National Library of Medicine ( #NLM), a division of the National Institutes of Health ( #NIH) in the United States. ZB Med is responding to concerns that the US administration under Donald Trump is cutting funding for the NIH. There are also fears that political influences could compromise PubMed's scientific integrity."

#Censorship #DefendResearch #Germany #Preservation #Takedowns #Trump #USPol #USPolitics

heise online

Wegen Trump: Zentralbibliothek Medizin baut Alternative zu US-Datenbank auf

Ein deutsches Informationszentrum will eine Alternative zur PubMed-Datenbank in den USA entwickeln, um die Informationsversorgung in der Biomedizin zu sichern.
  • Copy link
  • Flag this post
  • Block
Björn Brembs
@brembs@mastodon.social  ·  activity timestamp 8 months ago

How it started and how it's going...
PubMed in 2013 and PubMed in 2025

Yes, 12 years of complete inaction on #PubMed and all the other thousands of research databases hosted by single points of failure. What does it take for #science to wake up from hibernation and leave its digital cave?

https://www.nature.com/articles/d41586-025-00674-3

#medicine #academicchatter

screenshot of nature article from 2025 about pubmed being briefly offline and users being scared that the Trump regime may take it offline permamently.
screenshot of nature article from 2025 about pubmed being briefly offline and users being scared that the Trump regime may take it offline permamently.
screenshot of nature article from 2025 about pubmed being briefly offline and users being scared that the Trump regime may take it offline permamently.
Screenshot of pubmed from 2013 with a warning that the government shutdown may mean pubmed may have to shut down, too.
Screenshot of pubmed from 2013 with a warning that the government shutdown may mean pubmed may have to shut down, too.
Screenshot of pubmed from 2013 with a warning that the government shutdown may mean pubmed may have to shut down, too.
  • Copy link
  • Flag this post
  • Block
petersuber
@petersuber@fediscience.org  ·  activity timestamp 8 months ago

Update. Therese Choquette ran searches on #PubMed and may have found gaps corresponding to terms banned by the #Trump admin.
https://www.linkedin.com/posts/therese-choquette-former-vallerskog-1531132_pubmed-activity-7301996327691816961-afAN?rcm=ACoAAADEjlkBbyOxuygZagmqeEC6540rx1UQQSs

PS: Unfortunately she compared US PubMed with Europe PubMed Central, which is apples to oranges. (PubMed is metadata-only and PMC is full text.) Can we crowdsource some systematic searches comparing (1) PubMed now with PubMed before Trump, e.g. in the Wayback Machine, and (2) US PMC with Europe PMC?

#DefendResearch #Trump#USPol#USPolitics

  • Copy link
  • Flag this post
  • Block
Kathleen Fitzpatrick
@kfitz@hcommons.social  ·  activity timestamp 8 months ago

Friends and colleagues: if you have published work that has previously been made available via #PubMed or other federally-controlled architecture, I strongly encourage you to find other ways to share it. For instance: KC Works is a non-profit, community-governed repository (built on top of CERN's InvenioRDM). We support all fields, all languages, all geographical locations. Join us and ensure that your work can remain available to all. https://works.hcommons.org

  • Copy link
  • Flag this post
  • Block
petersuber
@petersuber@fediscience.org  ·  activity timestamp 9 months ago

This is very welcome news in the face of Trumpist depredations of US public data.
https://lil.law.harvard.edu/blog/2025/01/30/preserving-public-u-s-federal-data/

"In recent months the Harvard Law School [@harvard_law] Library Innovation Lab [@harvardlil] has created a data vault to download, sign as authentic, and make available copies of public government data that is most valuable to researchers, scholars, civil society and the public at large across every field. To begin, we have collected major portions of the datasets tracked by data.gov, federal #Github repositories, and #PubMed...."

#DataGov#DefendResearch#Libraries#OpenData#Preservation #Trump #TrumpVResearch#USPol#USPolitics

  • Copy link
  • Flag this post
  • Block
Log in

bonfire.cafe

A space for Bonfire maintainers and contributors to communicate

bonfire.cafe: About · Code of conduct · Privacy · Users · Instances
Bonfire social · 1.0.0 no JS en
Automatic federation enabled
  • Explore
  • About
  • Members
  • Code of Conduct
Home
Login