Chart: Est. & Reported U.S. Variant Proportions by Common Name
Sources: CDC, Cov-Lineages, NYITCOM, others

[ beadsland on Ko-fi ]

Reskin of CDC's Variants Nowcast, and any significant variants in GISAID not broken out by CDC.

Four bar-style tree-charts, for four-week periods through 8/31–9/27. Legend of last four-week period, organized by subheadings of color-grouped families and convergent clusters. Percentages overlay each color key, reflecting share as of most recent tree-chart.

Mostly WHO-Vaccine-Target JN.1 dynasty. Stratus XFG family accounts for largely share.

For 8/31–9/27, packed bubble charts fill single-variant tiles, reflecting GISAID detail not shown by CDC's Nowcast.

Legend:

LF.7 + NTD-meets-RBD [red]:
85% - XFG.2†, XFG.3†, XFG.4.1†, XFG.3.4.1 / QF†, XFG.5.1†, XFG.14.1†, XFG.5.2†, XFG.8†, XFG.3.15† & other Stratus XFG

JN.1.11 [browns]:
0% - KP.3
0% - KP.1.1.3 / LP, PA.1 & MC.10.1
6% - NW.1 & other FDA-Vaccine-Target LP.8.1

JN.1 + FLiRT-LF-7 [blues]:
⅖% - LF.7.9, LF.7.7.1 / PV & LF.7.2.1 / PC
⅗% - other LF.7

LF.7 + NTD-meets-RBD [purple]:
⅗% - XFC

JN.1 [greens]:
¼% - JN.1.16.1 / LF
0% - XEC & XEC.4

Other [greys]:
7% - Nimbus NB.1.8.1 / PQ, XDV.1 & other Omicron-2 BA.2
⅒% - Omicron B.1.1.529 / BA & Other (not specified)
_____

Omicron-2 BA.2 is a child of 2022 Omicron B.1.1.529.

Stratus XFG is a child of April's WHO-Vaccine-Target scion LF.7 and Juneish JN.1.11 scion LP.8.1.2 / NW.

[Some footnotes omitted, due to too many recombinants.]
Chart: Est. & Reported U.S. Variant Proportions by Common Name Sources: CDC, Cov-Lineages, NYITCOM, others [ beadsland on Ko-fi ] Reskin of CDC's Variants Nowcast, and any significant variants in GISAID not broken out by CDC. Four bar-style tree-charts, for four-week periods through 8/31–9/27. Legend of last four-week period, organized by subheadings of color-grouped families and convergent clusters. Percentages overlay each color key, reflecting share as of most recent tree-chart. Mostly WHO-Vaccine-Target JN.1 dynasty. Stratus XFG family accounts for largely share. For 8/31–9/27, packed bubble charts fill single-variant tiles, reflecting GISAID detail not shown by CDC's Nowcast. Legend: LF.7 + NTD-meets-RBD [red]: 85% - XFG.2†, XFG.3†, XFG.4.1†, XFG.3.4.1 / QF†, XFG.5.1†, XFG.14.1†, XFG.5.2†, XFG.8†, XFG.3.15† & other Stratus XFG JN.1.11 [browns]: 0% - KP.3 0% - KP.1.1.3 / LP, PA.1 & MC.10.1 6% - NW.1 & other FDA-Vaccine-Target LP.8.1 JN.1 + FLiRT-LF-7 [blues]: ⅖% - LF.7.9, LF.7.7.1 / PV & LF.7.2.1 / PC ⅗% - other LF.7 LF.7 + NTD-meets-RBD [purple]: ⅗% - XFC JN.1 [greens]: ¼% - JN.1.16.1 / LF 0% - XEC & XEC.4 Other [greys]: 7% - Nimbus NB.1.8.1 / PQ, XDV.1 & other Omicron-2 BA.2 ⅒% - Omicron B.1.1.529 / BA & Other (not specified) _____ Omicron-2 BA.2 is a child of 2022 Omicron B.1.1.529. Stratus XFG is a child of April's WHO-Vaccine-Target scion LF.7 and Juneish JN.1.11 scion LP.8.1.2 / NW. [Some footnotes omitted, due to too many recombinants.]
Chart: Est. & Reported U.S. Variant Proportions by Common Name
Sources: CDC, Cov-Lineages, NYITCOM, others

[ beadsland on Ko-fi ]

Reskin of CDC's Variants Nowcast, and any significant variants in GISAID not broken out by CDC.

Four bar-style tree-charts, for four-week periods through 8/31–9/27. Legend of last four-week period, organized by subheadings of color-grouped families and convergent clusters. Percentages overlay each color key, reflecting share as of most recent tree-chart.

Mostly WHO-Vaccine-Target JN.1 dynasty. Stratus XFG family accounts for largely share.

For 8/31–9/27, packed bubble charts fill single-variant tiles, reflecting GISAID detail not shown by CDC's Nowcast.

Legend:

LF.7 + NTD-meets-RBD [red]:
85% - XFG.2†, XFG.3†, XFG.4.1†, XFG.3.4.1 / QF†, XFG.5.1†, XFG.14.1†, XFG.5.2†, XFG.8†, XFG.3.15† & other Stratus XFG

JN.1.11 [browns]:
0% - KP.3
0% - KP.1.1.3 / LP, PA.1 & MC.10.1
6% - NW.1 & other FDA-Vaccine-Target LP.8.1

JN.1 + FLiRT-LF-7 [blues]:
⅖% - LF.7.9, LF.7.7.1 / PV & LF.7.2.1 / PC
⅗% - other LF.7

LF.7 + NTD-meets-RBD [purple]:
⅗% - XFC

JN.1 [greens]:
¼% - JN.1.16.1 / LF
0% - XEC & XEC.4

Other [greys]:
7% - Nimbus NB.1.8.1 / PQ, XDV.1 & other Omicron-2 BA.2
⅒% - Omicron B.1.1.529 / BA & Other (not specified)
_____

Omicron-2 BA.2 is a child of 2022 Omicron B.1.1.529.

Stratus XFG is a child of April's WHO-Vaccine-Target scion LF.7 and Juneish JN.1.11 scion LP.8.1.2 / NW.

[Some footnotes omitted, due to too many recombinants.]
Chart: Est. & Reported U.S. Variant Proportions by Common Name Sources: CDC, Cov-Lineages, NYITCOM, others [ beadsland on Ko-fi ] Reskin of CDC's Variants Nowcast, and any significant variants in GISAID not broken out by CDC. Four bar-style tree-charts, for four-week periods through 8/31–9/27. Legend of last four-week period, organized by subheadings of color-grouped families and convergent clusters. Percentages overlay each color key, reflecting share as of most recent tree-chart. Mostly WHO-Vaccine-Target JN.1 dynasty. Stratus XFG family accounts for largely share. For 8/31–9/27, packed bubble charts fill single-variant tiles, reflecting GISAID detail not shown by CDC's Nowcast. Legend: LF.7 + NTD-meets-RBD [red]: 85% - XFG.2†, XFG.3†, XFG.4.1†, XFG.3.4.1 / QF†, XFG.5.1†, XFG.14.1†, XFG.5.2†, XFG.8†, XFG.3.15† & other Stratus XFG JN.1.11 [browns]: 0% - KP.3 0% - KP.1.1.3 / LP, PA.1 & MC.10.1 6% - NW.1 & other FDA-Vaccine-Target LP.8.1 JN.1 + FLiRT-LF-7 [blues]: ⅖% - LF.7.9, LF.7.7.1 / PV & LF.7.2.1 / PC ⅗% - other LF.7 LF.7 + NTD-meets-RBD [purple]: ⅗% - XFC JN.1 [greens]: ¼% - JN.1.16.1 / LF 0% - XEC & XEC.4 Other [greys]: 7% - Nimbus NB.1.8.1 / PQ, XDV.1 & other Omicron-2 BA.2 ⅒% - Omicron B.1.1.529 / BA & Other (not specified) _____ Omicron-2 BA.2 is a child of 2022 Omicron B.1.1.529. Stratus XFG is a child of April's WHO-Vaccine-Target scion LF.7 and Juneish JN.1.11 scion LP.8.1.2 / NW. [Some footnotes omitted, due to too many recombinants.]
Chart: Estimated and Reported U.S. Variant Proportions by Common Name
Sources: CDC, Cov-Lineages, NYITCOM, D. Focosi, WHN, others

[ beadsland on Ko-fi ]

Reskin of CDC's Variants Nowcast, and any significant variants in GISAID not broken out by CDC.

Four bar-style tree-charts, for four-week periods through Aug 31–Sep 27. Legend of last four-week period, organized by subheadings of color-grouped families and convergent clusters. Percentages overlay each color key, reflecting share as of most recent tree-chart.

Mostly WHO-Vaccine-Target JN.1 dynasty. Stratus XFG family accounts for largely share.

For 8/3–8/30, packed bubble charts fill single-variant tiles, indicating diversification (per GISAID) not apparent from CDC's Nowcast.

Legend:

LF.7 + NTD-meets-RBD [red]:
85% - XFG.3†, XFG.2† & other Stratus XFG

JN.1.11 [browns]:
0% - KP.3
0% - KP.1.1.3 / LP, PA.1 & MC.10.1
6% - NW.1 & other FDA-Vaccine-Target LP.8.1

JN.1 + FLiRT-LF-7 [blues]:
⅖% - LF.7.9, LF.7.7.1 / PV & LF.7.2.1 / PC
⅗% - other LF.7

LF.7 + NTD-meets-RBD [purples]:
⅗% - XFC
0% - other LF.7 + NTD-meets-RBD

JN.1 [greens]:
¼% - JN.1.16.1 / LF
0% - XEC & XEC.4

Other [greys]:
7% - Nimbus NB.1.8.1 / PQ, PQ.2†, XDV.1 & other Omicron-2 BA.2
⅒% - Omicron B.1.1.529 / BA & Other (not specified)
_____

Omicron-2 BA.2 is a child of 2022 Omicron B.1.1.529.

Stratus XFG is a child of April's WHO-Vaccine-Target scion LF.7 and Juneish JN.1.11 scion LP.8.1.2 / NW.

[Some footnotes omitted, due to too many recombinants.]
Chart: Estimated and Reported U.S. Variant Proportions by Common Name Sources: CDC, Cov-Lineages, NYITCOM, D. Focosi, WHN, others [ beadsland on Ko-fi ] Reskin of CDC's Variants Nowcast, and any significant variants in GISAID not broken out by CDC. Four bar-style tree-charts, for four-week periods through Aug 31–Sep 27. Legend of last four-week period, organized by subheadings of color-grouped families and convergent clusters. Percentages overlay each color key, reflecting share as of most recent tree-chart. Mostly WHO-Vaccine-Target JN.1 dynasty. Stratus XFG family accounts for largely share. For 8/3–8/30, packed bubble charts fill single-variant tiles, indicating diversification (per GISAID) not apparent from CDC's Nowcast. Legend: LF.7 + NTD-meets-RBD [red]: 85% - XFG.3†, XFG.2† & other Stratus XFG JN.1.11 [browns]: 0% - KP.3 0% - KP.1.1.3 / LP, PA.1 & MC.10.1 6% - NW.1 & other FDA-Vaccine-Target LP.8.1 JN.1 + FLiRT-LF-7 [blues]: ⅖% - LF.7.9, LF.7.7.1 / PV & LF.7.2.1 / PC ⅗% - other LF.7 LF.7 + NTD-meets-RBD [purples]: ⅗% - XFC 0% - other LF.7 + NTD-meets-RBD JN.1 [greens]: ¼% - JN.1.16.1 / LF 0% - XEC & XEC.4 Other [greys]: 7% - Nimbus NB.1.8.1 / PQ, PQ.2†, XDV.1 & other Omicron-2 BA.2 ⅒% - Omicron B.1.1.529 / BA & Other (not specified) _____ Omicron-2 BA.2 is a child of 2022 Omicron B.1.1.529. Stratus XFG is a child of April's WHO-Vaccine-Target scion LF.7 and Juneish JN.1.11 scion LP.8.1.2 / NW. [Some footnotes omitted, due to too many recombinants.]
Chart: Annoplot Dataviz Library*: Project Profile
Subtitle: 12.3K lines† across component modules and significant submodules.

Multi-level pie chart organized into six major categories by color. Each outer wedge shows a tally of number of lines for that sub-component.

Green variants devpie/slice wedge notably exploded out, main devpie & variants wedges slightly; grey dot wedge also exploded somewhat.

A legend is split across both sides of the chart. Each key mirrors one of the wedges on the dual pie chart, along with a sentence or two description of each (sub)component thereby represented.

Caption:

* Pre-release development version 2025-09-30.

† Python, Markdown, C, Elixir, and shell source files. Blank lines omitted form tallies.

Exploded wedges reflect proportions of lines changed in prior 31 days. Dotted areas represent non-blank comment lines and Markdown.

Wedges:

🔴 levels
🧀 [blank wedge] - 460, 🧀 hospitals - 282

🟣 chirp
🧀 [blank] - 537

🔵 annoplot
🧀 [blank] - 544, 🧀 artists - 419, 🧀 artists/adorn - 360, 🧀 artists/deco - 511, 🧀 artists/legend - 419, 🧀 artists/text - 331, 🧀 coord - 583, 🧀 coord/base - 259, 🧀 margin - 256, 🧀 util - 537

🟢 tiop
🧀 [blank] - 235, 🧀 bullseye - 321, 🧀 capacity - 455, 🧀 devpie - 570, 🧀 devpie/slice - 295, 🧀 variants - 754, 🧀 variants/legend - 389, 🧀 variants/orchard - 432, 🧀 variants/rajdash - 600, 🧀 variants/tree - 437, 🧀 …/tree/branch - 359

🟤 bots
🧀 [blank] - 181, 🧀 talky - 821

⚫ . [period by itself]
🧀 [blank] - 458, 🧀 TODO.md - 497
Chart: Annoplot Dataviz Library*: Project Profile Subtitle: 12.3K lines† across component modules and significant submodules. Multi-level pie chart organized into six major categories by color. Each outer wedge shows a tally of number of lines for that sub-component. Green variants devpie/slice wedge notably exploded out, main devpie & variants wedges slightly; grey dot wedge also exploded somewhat. A legend is split across both sides of the chart. Each key mirrors one of the wedges on the dual pie chart, along with a sentence or two description of each (sub)component thereby represented. Caption: * Pre-release development version 2025-09-30. † Python, Markdown, C, Elixir, and shell source files. Blank lines omitted form tallies. Exploded wedges reflect proportions of lines changed in prior 31 days. Dotted areas represent non-blank comment lines and Markdown. Wedges: 🔴 levels 🧀 [blank wedge] - 460, 🧀 hospitals - 282 🟣 chirp 🧀 [blank] - 537 🔵 annoplot 🧀 [blank] - 544, 🧀 artists - 419, 🧀 artists/adorn - 360, 🧀 artists/deco - 511, 🧀 artists/legend - 419, 🧀 artists/text - 331, 🧀 coord - 583, 🧀 coord/base - 259, 🧀 margin - 256, 🧀 util - 537 🟢 tiop 🧀 [blank] - 235, 🧀 bullseye - 321, 🧀 capacity - 455, 🧀 devpie - 570, 🧀 devpie/slice - 295, 🧀 variants - 754, 🧀 variants/legend - 389, 🧀 variants/orchard - 432, 🧀 variants/rajdash - 600, 🧀 variants/tree - 437, 🧀 …/tree/branch - 359 🟤 bots 🧀 [blank] - 181, 🧀 talky - 821 ⚫ . [period by itself] 🧀 [blank] - 458, 🧀 TODO.md - 497
Chart: Est. & Reported U.S. Variant Proportions by Common Name
Sources: CDC, Cov-Lineages, NYITCOM, others

[ beadsland on Ko-fi ]

Reskin of CDC's Variants Nowcast, and any significant variants in GISAID not broken out by CDC.

Four bar-style tree-charts, for four-week periods through 8/3–8/30. Legend of last four-week period, organized by subheadings of color-grouped families and convergent clusters. Percentages overlay each color key, reflecting share as of most recent tree-chart.

Stratus XFG family accounts for over three quarters share.

For 8/3–8/30, packed bubble charts fill single-variant tiles, reflecting GISAID detail not shown by CDC's Nowcast.

Legend:

LF.7 + NTD-meets-RBD [red]:
78% - XFG.3†, XFG.2† & other Stratus XFG

Omicron-2 BA.2 [brown]:
14% - XDV.1, PQ.2† & other Nimbus NB.1.8.1 / PQ

JN.1 [greens]:
5% - FDA-Vaccine-Target LP.8.1, NW.1, PA.1 & MC.28.1
⅕% - XEC
0% - KP.3, XEK & other WHO-Vaccine-Target JN.1

JN.1 + FLiRT-LF-7 [blues]:
⅖% - LF.7.9 & LF.7.2.1 / PC
1% - other LF.7

LF.7 + NTD-meets-RBD [purples]:
½% - XFC
0% - other LF.7 + NTD-meets-RBD

Other [greys]:
0% - other Omicron-2 BA.2
⅒% - Other (not specified)
_____

Omicron-2 BA.2 is a child of 2022 Omicron B.1.1.529.

Stratus XFG is a child of April's WHO-Vaccine-Target scion LF.7 and Juneish WHO-Vaccine-Target scion LP.8.1.2 / NW.

WHO-Vaccine-Target JN.1 is a grandchild of Winter 2023–24's Pirola BA.2.86.

[Some footnotes omitted, due to too many recombinants.]
Chart: Est. & Reported U.S. Variant Proportions by Common Name Sources: CDC, Cov-Lineages, NYITCOM, others [ beadsland on Ko-fi ] Reskin of CDC's Variants Nowcast, and any significant variants in GISAID not broken out by CDC. Four bar-style tree-charts, for four-week periods through 8/3–8/30. Legend of last four-week period, organized by subheadings of color-grouped families and convergent clusters. Percentages overlay each color key, reflecting share as of most recent tree-chart. Stratus XFG family accounts for over three quarters share. For 8/3–8/30, packed bubble charts fill single-variant tiles, reflecting GISAID detail not shown by CDC's Nowcast. Legend: LF.7 + NTD-meets-RBD [red]: 78% - XFG.3†, XFG.2† & other Stratus XFG Omicron-2 BA.2 [brown]: 14% - XDV.1, PQ.2† & other Nimbus NB.1.8.1 / PQ JN.1 [greens]: 5% - FDA-Vaccine-Target LP.8.1, NW.1, PA.1 & MC.28.1 ⅕% - XEC 0% - KP.3, XEK & other WHO-Vaccine-Target JN.1 JN.1 + FLiRT-LF-7 [blues]: ⅖% - LF.7.9 & LF.7.2.1 / PC 1% - other LF.7 LF.7 + NTD-meets-RBD [purples]: ½% - XFC 0% - other LF.7 + NTD-meets-RBD Other [greys]: 0% - other Omicron-2 BA.2 ⅒% - Other (not specified) _____ Omicron-2 BA.2 is a child of 2022 Omicron B.1.1.529. Stratus XFG is a child of April's WHO-Vaccine-Target scion LF.7 and Juneish WHO-Vaccine-Target scion LP.8.1.2 / NW. WHO-Vaccine-Target JN.1 is a grandchild of Winter 2023–24's Pirola BA.2.86. [Some footnotes omitted, due to too many recombinants.]
alcinnz and 1 other boosted
Kathy Reid boosted