Does anyone know if the code for generating all of the underlying bits for #recount3 (genome indices, exons, genes, etc) for a different genome organism (i.e. zebrafish) is available publicly?

I know of the monorail-external repo that helps someone running their own human or mouse samples in the same workflow, but I've got data from zebrafish that I'd love to run similarly.

#Bioinformatics #Bioconductor #RStats

Maybe @benlangmead (or another) knows of something I missed?

Does anyone know if the code for generating all of the underlying bits for #recount3 (genome indices, exons, genes, etc) for a different genome organism (i.e. zebrafish) is available publicly?

I know of the monorail-external repo that helps someone running their own human or mouse samples in the same workflow, but I've got data from zebrafish that I'd love to run similarly.

#Bioinformatics #Bioconductor #RStats

Maybe @benlangmead (or another) knows of something I missed?