In 2020, I reran computational experiments made in 2006 for my PhD, and packaged the whole analysis-to-paper-production pipeline with Guix:
https://gitlab.inria.fr/lcourtes-phd/edcc-2006-redone
https://dx.doi.org/10.5281/zenodo.3886739

A fellow #Guix hacker reran this Guixified pipeline days ago and it still works as intended.

#ReproducibleResearch

But here we are. The promise of reproducible research can only be upheld if one can re-deploy software years
later.

People working in #ReproducibleResearch and #OpenScience should realize how bad the situation is, what solutions
exist, and what promises they can make.

In 2020, I reran computational experiments made in 2006 for my PhD, and packaged the whole analysis-to-paper-production pipeline with Guix:
https://gitlab.inria.fr/lcourtes-phd/edcc-2006-redone
https://dx.doi.org/10.5281/zenodo.3886739

A fellow #Guix hacker reran this Guixified pipeline days ago and it still works as intended.

#ReproducibleResearch

In 2020, I reran computational experiments made in 2006 for my PhD, and packaged the whole analysis-to-paper-production pipeline with Guix:
https://gitlab.inria.fr/lcourtes-phd/edcc-2006-redone
https://dx.doi.org/10.5281/zenodo.3886739

A fellow #Guix hacker reran this Guixified pipeline days ago and it still works as intended.

#ReproducibleResearch

New server, new #introduction:

👋 Hi! I'm Eric! I'm a scientific programmer & educator who writes mostly code. I currently work part time at #UniversityOfArizona where I help researchers by making R packages, #Shiny apps, automated data workflows, and training them on #ReproducibleResearch practices. I also mentor data scientists for @Posit Academy. I am #OpenToWork as a contractor if any of those skills sound useful to you.

My background is in plant chemical ecology and population ecology and for my PhD I studied #tea and did field work in China. I love tea (although I've been drinking coffee more and more lately) and practice #GongFuCha when I can. I love #foraging and tasting new things.

I currently live in #Tucson but the #BayArea will always be my home.

#rstats #rse #datascience #dataviz #ecology #chemistry #statistics

New server, new #introduction:

👋 Hi! I'm Eric! I'm a scientific programmer & educator who writes mostly code. I currently work part time at #UniversityOfArizona where I help researchers by making R packages, #Shiny apps, automated data workflows, and training them on #ReproducibleResearch practices. I also mentor data scientists for @Posit Academy. I am #OpenToWork as a contractor if any of those skills sound useful to you.

My background is in plant chemical ecology and population ecology and for my PhD I studied #tea and did field work in China. I love tea (although I've been drinking coffee more and more lately) and practice #GongFuCha when I can. I love #foraging and tasting new things.

I currently live in #Tucson but the #BayArea will always be my home.

#rstats #rse #datascience #dataviz #ecology #chemistry #statistics

Petr Knoth (Knowledge Media Institute, The Open University) talks about the reproducibility crisis, the role of software in science, and how source code availability is the very first prerequisite to address the crisis.

#SWH2025 #ReproducibleResearch